Job Description P63228 Confidence 93.76% Date Thu Jan 5 12:07:58 GMT 2012 Rank 146 Aligned Residues 139 % Identity 19% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		E	F	I	D	G	V	I	D	A	M	R	E	L	K	K	M	G	F	A	L	V	V	V	T	N	Q	S	G	I	A	R	G	K	F	T	E	A	Q	F	E	T	L	T	E	W	M	D	W	S	L	A	D	.	.	.	.	.	R	D	V	D	L	D	G	I	Y	Y	C	P	H	H	P	Q	G	S	V	E	E	F	R
Query Conservation																																																						.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	R	H	D	T	Y	K	T	V	C	E	A	K	T	L	G	L	S	I	K	M	L	T	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	A	R	E	T	S	R	Q	L	G	L	G	T	N	I	Y	N	A	E	R	L	G	L	G	G	G	G	D	M	P	G	S	E	V	Y	D	F	V	E
Template Known Secondary structure																		T								S	S		.	.	.	.	.	.	.	.	.	.	.	.												T	S	S		S				S	S	S	S	S	S		B				G	G	G	G	G	G	G	T	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.													.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		Q	V	C	D	C	R	K	P	H	P	G	M	L	L	S	A	R	D	Y	L	H	I	D	M	A	A	S	Y	M	V	G	D	K	L	E	D	M	Q	A	A	V	A	A	N	V	G	T	K	V	L	V	R	T	G	K	P	I	T	P	E	A	E	N	A	A	D	W	V	L	.	.	N	S	L	A	D	L	P	Q	A
Query Conservation																																																																							.	.
Alig confidence																																																			.	.	.	.	.																.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		A	A	D	G	F	A	E	V	F	P	Q	H	K	Y	N	V	V	E	I	L	Q	Q	R	G	Y	L	V	A	M	T	G	D	G	V	N	D	A	P	S	L	K	K	A	D	T	G	I	A	V	.	.	.	.	.	E	G	S	S	D	A	A	R	S	A	A	D	I	V	F	L	A	P	G	L	G	A	I	I	D	A
Template Known Secondary structure		T	T	S				S			S	T											T	T	T										G	G	G							S	S						.	.	.	.	.	T	T	S							S	S	S				S	S			S
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.						.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
		183	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		678	.	680

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions