Job Description P0A6V5 Confidence 99.87% Date Thu Jan 5 11:04:00 GMT 2012 Rank 35 Aligned Residues 89 % Identity 19% Template c3g5jA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630 Resolution 1.76 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																																			.	50	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	H	Q	K	L	Q	E	K	E	A	V	L	V	D	I	R	D	P	Q	S	F	A	M	G	H	A	V	Q	A	F	H	L	T	N	D	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	F	M	R	D	N	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	E	K	A	L	K	L	D	K	V	I	F	V	D	V	R	T	E	G	E	Y	E	E	D	H	I	L	N	A	I	N	X	P	L	F	K	N	N	E	H	N	E	V	G	T	I	Y	K	X	Q	G	K	H	E	A	I	Q	K	G	F	D	Y	V	S	Y	K	L	K	D	I	Y	L	Q	A	A	E	L	A	L
Template Known Secondary structure							T	T		T	T							S											T	T						S	S																													G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		57	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		F	D	T	P	V	M	V	M	C	Y	.	H	G	N	S	S	K	G	A	A	Q	Y	L	L	Q	Q	G	Y	D	V	V	Y	S	I	D	G	G	F	E	A	W	Q	R	Q	F
Query Conservation												.
Alig confidence												.																		.
Template Conservation																														.
Template Sequence		N	Y	D	N	I	V	I	Y	C	A	R	G	G	X	R	S	G	S	I	V	N	L	L	S	S	L	G	V	.	N	V	Y	Q	L	E	G	G	Y	K	A	Y	R	N	F	V
Template Known Secondary structure		T		S							S	S	S	S													T	T		.						T	T
Template Predicted Secondary structure																														.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions