|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | P | A | F | N | I | H | N | A | E | T | I | Q | A | I | L | E | V | C | S | E | M | R | S | P | V | I | L | A | G | T | P | G | T | F | K | H | I | A | L | E | E | I | Y | A | L | C | S | A | Y | S | T | T | Y | N | M | P | L | A | L | H | L | D | H | H | E | S | L | D | D | I | R | R | K | V | H | A | G | V |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . |   |   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |
|   |   |   |
|   |
|
|
| . |
|   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
G | G | V | I | M | D | V | V | N | A | E | Q | A | K | . |
. |
. |
. |
I | A | E | A | A | G | A | V | A | V | M | A | L | E | G | G | V | A | R | M | A | D | P | T | . |
. |
. |
. |
V | I | E | E | V | M | N | A | V | S | I | P | V | . |
M | A | K | V | R | I | G | H | Y | V | E | A | R | V | L | E | A | L | G | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S |  |  |  |  |  | . | . | . | . |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |
| S | S |
|  | . |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | A | M | I | D | G | S | H | F | P | F | A | E | N | V | K | L | V | K | S | V | V | D | F | C | H | S | Q | D | C | S | V | E | A | E | L | G | R | L | G | G | V | E | D | D | M | S | V | D | A | E | S | A | F | L | T | D | P | Q | E | A | K | R | F | V | E | L | T | G | V | D | S | L | A | V | A | I | G | T |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |   |   |
Template Sequence |   |
D | Y | I | D | E | S | E | V | L | T | P | A | D | E | E | F | H | I | D | K | R | Q | F | T | V | P | F | V | C | G | C | R | D | L | G | E | A | A | R | R | I | A | E | G | A | S | M | L | R | T | K | G | E | P | G | T | G | N | I | V | E | A | V | R | H | M | R | K | V | N | A | Q | I | R | K | V | V | N | M | S |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | T | S |
|
| S |
| S | S |
|
|
|
| G | G | G |
| S | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
179 | 180 | . | . | . | |
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | G | L | Y | . |
. |
S | K | T | P | K | I | D | F | Q | R | L | A | E | I | R | E | V | V | D | V | P | L | V | L | H | G | A | S | D | V | . |
P | D | E | F | V | R | R | T | I | E | L | G | V | T | K | V | N | V | A | T | E | L | . |
. |
. |
. |
. |
K | I | A | F | A | G | A | V | K | A | W | F | A | E | N |
Query Conservation |   |
  |
|
|   |
| . | . |   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   | . |   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |
| . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
E | D | E | L | V | A | E | A | K | Q | L | G | A | P | V | E | V | L | R | E | I | K | R | L | G | R | L | P | V | V | N | F | A | A | G | G | V | T | T | P | A | D | A | A | L | M | M | H | L | G | A | D | G | V | F | V | G | S | G | I | F | K | S | E | N | P | E | K | Y | A | R | A | I | V | E | A | T | T | H | Y |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | T | S |
| S | S |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| G | G | G | G | G | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Q | G | N | D | P | R | Y | Y | M | R | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | . |
. |
. |
D | Y | E | L | I | A | H | L |
Template Known Secondary structure |   |
T | . | . | . |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
| . | . | . |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | |
|
|
260 | . | . | . | . | . | . | . |
  |