Job Description P0AB74 Confidence 97.21% Date Thu Jan 5 11:14:47 GMT 2012 Rank 62 Aligned Residues 188 % Identity 18% Template d1xm3a_ SCOP info TIM beta/alpha-barrel ThiG-like ThiG-like Resolution 1.80

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	N	M	P	L	A	L	H	L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	.	.	.	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation										.	.	.	.
Template Sequence		S	F	Q	S	R	L	L	L	.	.	.	.	G	T	G	K	Y	P	S	F	D	I	Q	K	E	A	V	A	V	S	E	S	D	I	L	T	F	A	V	R	R	X	N	I	F	L	E	Q	L	D	L	S	K	Y	T	L	L	P	N	T	A	G	A	S	T	A	E	E	A	V	R	I	A	R	L	A	K	A	S	G
Template Known Secondary structure				S						.	.	.	.			S		S	S													T		S						T	T	S	S	T	T			T	T			G	G	G	S							T	T		S	S														T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	S	A	M	I	D	G	S	H	F	P	F	A	E	.	.	.	.	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		L	C	D	X	I	K	V	E	V	I	G	C	S	R	S	L	L	P	D	P	V	E	T	L	K	A	S	E	Q	L	L	E	E	G	F	I	V	L	P	Y	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	V	V	L	A	R	K	L	E	E	L	.	G	V	H	A	I	X	P
Template Known Secondary structure				S	S						B			T	T	T			B															T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												.	T		S		B
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E	N	P	Q	G	N
Query Conservation
Alig confidence							.								.	.																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.								.	.																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	S	P	I	.	G	S	G	Q	G	I	L	.	.	N	P	L	N	L	S	F	I	I	E	Q	A	K	V	P	V	I	V	D	A	G	I	G	S	P	.	K	D	A	A	Y	A	X	E	L	G	A	D	G	V	L	L	N	T	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D
Template Known Secondary structure			S	S	S	T	.	T						S	.	.													S	S		B				S				S		.									T	T		S					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure							.								.	.																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.		.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	R	Y	Y	M	R	V	G	M	D	A	M	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	V	K	X	A	R	A	X	K	L	A	V	E	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions