Job Description P0AB74 Confidence 65.32% Date Thu Jan 5 11:14:47 GMT 2012 Rank 353 Aligned Residues 214 % Identity 12% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	Y	L	L	Q	D	A	Q	A	N	G	Y	A	V	P	A	F	.	.	.	N	I	H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A
Query Conservation																				.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																		.				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.				.
Template Sequence		L	E	A	F	A	K	A	R	S	E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	.	L	L	E	I	G	L	P	Y	S	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L	V	R	E
Template Known Secondary structure											T	T	B									T	T	S	S													G	G	.	G		S	.	S																							T	T
Template Predicted Secondary structure																																								.				.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		Y	S	T	T	Y	N	M	P	L	A	L	H	L	D	.	.	.	.	.	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																						.	.								.	.	.	.																.	.	.								.	.
Template Conservation																																										.	.								.	.	.	.																.	.	.								.	.
Template Sequence		V	R	A	L	T	E	K	P	L	F	L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	.	.	P	D	L	P	P	D	E	.	.	.	.	D	P	G	L	V	R	L	A	Q	E	I	G	L	E	T	.	.	.	V	F	L	L	A	P	T	.	.
Template Known Secondary structure								S																											T							.	.	T	T			G	G	G	.	.	.	.												T				.	.	.						T	T	.	.
Template Predicted Secondary structure																																										.	.								.	.	.	.																.	.	.								.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	T	D	A	R	I	A	T	V	V	R	H	A	T	G	F	V	Y	A	V	S	V	E	.	.	.	.	.	.	.	.	.	.	.	.	V	K	D	L	V	R	R	I	K	A	R	T	A	L	P	V	A	V	G	F	G	V	S	G	K	A	T	.	A	A	Q	A	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T			S									.	.	.	.	.	.	.	.	.	.	.	.										T	T			S						S				S				.					.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																												.					.	.
Template SS confidence
													155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E	N	P	Q	G	N	D	P	R	Y	Y	M	R	V	G	M	D	A	M	K	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	.	.	.	.	.	.	.	.	.	.	.	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q	G	L	Q	R
Template Known Secondary structure		T	T	S	S														.	.	.	.	.	.	.	.	.	.	.	T	T															B
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions