Job Description P0AB74 Confidence 97.59% Date Thu Jan 5 11:14:47 GMT 2012 Rank 49 Aligned Residues 231 % Identity 13% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																		.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	Y	L	L	Q	D	A	Q	A	N	G	Y	A	V	P	.	.	.	.	A	F	N	I	H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	K	H	I	A	L	E	E	I	Y	A
Query Conservation																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	N	L	F	A	Q	L	N	D	R	R	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E
Template Known Secondary structure												T	T										T	T	S	S															T	T		S	S								S			T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		65	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure											.										.	.	.	.	.
Query SS confidence											.										.	.	.	.	.
Query Sequence		L	C	S	A	Y	S	T	T	Y	.	N	M	P	L	A	L	H	L	D	.	.	.	.	.	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L
Query Conservation											.										.	.	.	.	.
Alig confidence											.										.	.	.	.	.																								.	.					.	.	.	.																	.	.	.
Template Conservation																																																	.	.					.	.	.	.																	.	.	.
Template Sequence		M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	.	.	V	P	V	E	.	.	.	.	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	.	.	.	I	F	I	C
Template Known Secondary structure											S	S	S													T	T													T							T	T	.	.			G	G	.	.	.	.	G											T	T				.	.	.
Template Predicted Secondary structure																																																	.	.					.	.	.	.																	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	.	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F
Query Conservation																																				.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.	.																										.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																										.
Template Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	.	.	L	H	H	L	I	E	K	L	K	E	Y	H	A	A	P	A	L	Q	G	F	G	I	S	S	P	.	E	Q
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															S						S	S	S	S				S	S	S				.	.											T	T								S	S			S		.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																										.
Template SS confidence
		155															.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	T	I	E	L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E	N	P	Q	G	N	D	P	R	Y	Y	M	R	V	G	M	D	A	M	K	E	V	V	R
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.									.	.
Template Conservation																					.	.	.	.	.	.	.	.									.	.
Template Sequence		V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	.	.	.	.	.	.	.	.	K	I	I	E	K	N	L	A	.	.	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A	M	K	A
Template Known Secondary structure								T	T		S										.	.	.	.	.	.	.	.						T	T	T	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.									.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions