|   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | S | A | Y | S | T | T | Y | N | M | P | L | A | L | H | L | D | H | H | E | S | L | D | D | I | R | R | K | V | H | A | G | V | R | S | A | M | I | D | G | S | H | F | P | F | A | E | N | V | K | L | V | K | S | V | V | D | F | C | H | S | Q | D | C | S | V | E | A | E | L | G | R | L | G | G | V | E | D | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |
|
| . |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Sequence |   |
F | L | P | I | V | S | Q | I | A | P | Q | P | I | . |
L | C | K | D | F | I | I | D | P | Y | Q | I | Y | L | A | R | Y | Y | Q | A | D | A | C | L | L | M | L | S | V | L | D | D | D | Q | . |
. |
. |
. |
Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | L | T | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| S |
|  | . |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | T | T | T |
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | V | D | A | E | S | A | F | L | T | D | P | Q | E | A | K | R | F | V | E | L | T | G | V | D | S | L | A | V | A | I | G | T | A | H | G | L | Y | S | K | T | P | K | I | D | F | Q | R | L | A | E | I | R | E | V | V | D | V | P | L | V | L | H | G | A | S | D | V | P | D | E | F | V | R | R | T | I | E | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
| . |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | N | E | E | E | Q | . |
E | R | A | I | A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | L | . |
. |
. |
. |
. |
S | I | D | L | N | R | T | R | E | L | A | P | K | L | G | H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | R | E | L | S | H |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
| S |  |  |  |  | . |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |  |  | T | T | T | T | . | . | . | . | . |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
165 | . | . | . | . | 170 | |
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | T | K | V | N | V | A | T | E | L |
Query Conservation |   |
|
|   |
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
F | A | N | G | F | L | I | G | S | A | L |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . |
  |