Job Description P0AB74 Confidence 42.00% Date Thu Jan 5 11:14:47 GMT 2012 Rank 451 Aligned Residues 158 % Identity 18% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																	.	.																																																									.	.	.	.	.	.	.
Query SS confidence																	.	.																																																									.	.	.	.	.	.	.
Query Sequence		D	A	Q	A	N	G	Y	A	V	P	A	F	N	I	H	.	.	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M	P	L	A	L	H	L	D	.	.	.	.	.	.	.
Query Conservation																	.	.																																																									.	.	.	.	.	.	.
Alig confidence																	.	.																						.	.	.	.						.							.																			.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.						.							.
Template Sequence		S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	I	I	M	.	.	.	.	V	D	L	I	V	.	G	W	T	C	I	Q	.	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R
Template Known Secondary structure						T	S											S	S														T	T		S				.	.	.	.			G	G	G	.							.								T	T	T								T	T	T					S
Template Predicted Secondary structure																																								.	.	.	.						.							.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.		.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
					83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.															.																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.															.																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	H	H	E	S	L	D	D	I	R	R	K	V	H	A	.	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	.	.	.	.	.	.	.	.	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E
Query Conservation		.	.	.															.																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.																														.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	V	G	K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	.	.	.	.	.	.	M	P	V
Template Known Secondary structure			T	T	S	S														T		S							T	T	S	S	T	T																S					B	G	G	G	T	B		S					T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T	I	G
Template Known Secondary structure					S			G	G	G										S	S											T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions