Job Description P0AB74 Confidence 89.30% Date Thu Jan 5 11:14:47 GMT 2012 Rank 225 Aligned Residues 127 % Identity 16% Template c3q45E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Resolution 3.00 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	.	.
Query Conservation																																																																																.	.
Alig confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.										.	.
Template Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		A	A	D	A	V	Q	I	K	K	N	G	F	E	I	I	K	V	K	V	G	G	.	S	K	E	L	D	V	E	R	I	R	M	I	R	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S	I	T	L	R	I	D	A	N	Q	G	W	.	.	S	V	E	T	A	I	E	T	L	T	L
Template Known Secondary structure											T	T		S								S	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S							T	T		B	.	.
Template Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.								.	.	.
Predicted Secondary structure		.																																																														.								.	.	.	.	.	.	.
Query SS confidence		.																																																														.								.	.	.	.	.	.	.
Query Sequence		.	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E	L	G	.	V	T	K	V	N	V	A	.	.	.	.	.	.	.	T	E	L
Query Conservation		.																																																														.								.	.	.	.	.	.	.
Alig confidence		.									.	.	.	.	.	.	.	.	.	.																										.																		.								.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		L	E	P	Y	N	I	Q	H	C	.	.	.	.	.	.	.	.	.	.	E	E	P	V	S	R	N	L	Y	T	A	L	P	K	I	R	Q	A	C	R	I	P	I	M	A	.	D	E	S	C	C	N	S	F	D	A	E	R	L	I	Q	I	Q	A	C	D	S	F	N	L	K	L	S	K	S	A	G	I	T	N	A
Template Known Secondary structure			G	G	G			S			.	.	.	.	.	.	.	.	.	.				B		G	G	G	G	G	G									S	S					.	S	T	T			S										T	T			S						T	T	T	T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		207	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		236	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	F	A	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	I	I	R	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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