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Job DescriptionP0AB74
Confidence55.55%DateThu Jan 5 11:14:47 GMT 2012
Rank399Aligned Residues145
% Identity11%Templatec3obeB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100. ........110.........120.........130.........140.........150.........
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Query Sequence  LDDIRRKVHAGVRSA. . . . . . . MIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQE
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Template Sequence  PNGLNRLAKAGYTDLEIFGYREDTGKFGDYNNTTFIASKDYKKXVDDAGLRISS. . SHLTPSLREYTKENXPKFDEFWKK
Template Known Secondary structure  TT



B
TTTS
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B
TT
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S




GGG
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   64.....70.........80.........90.........100.........110....... ..120.........130.........140.
 
   160.........170.........180.........190 .........200........ .210.....
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Query Sequence  AKRFVELTGVDSLAVAIGTAHGLYSKTPKID. . FQRLAEIREVVDVPLVLH. . . . . . . . . . . . . . . . . . . . . . GASDVPD
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Template Sequence  ATDIHAELGVSCXVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGT
Template Known Secondary structure  T
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SSTTT


SGGGS

TT



SS

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S
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   216...220.... .....230...
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Query Sequence  EFVRRTIEL. . . GVTKVNVAT
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Template Sequence  YIEELFLKNTDPDKVXFELDV
Template Known Secondary structure  S
TTT
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   224.....230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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