Job Description P0AB74 Confidence 97.64% Date Thu Jan 5 11:14:47 GMT 2012 Rank 48 Aligned Residues 192 % Identity 17% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.
Predicted Secondary structure																																																											.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M	P	L	A	L	H	L	D	H	H	.	.	.	.	.	E	S	L	D	D	I	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		I	P	G	L	T	N	X	A	S	T	X	K	Q	H	G	S	L	A	I	I	Q	L	A	.	.	.	.	.	H	A	G	R	F	S	N	Q	A	I	L	N	F	G	K	V	Y	G	P	S	P	X	T	L	H	S	P	I	E	H	V	V	I	A	X	S	H	E	K	I	N	S	I	I	Q	Q	Y	R	D	A	T	L
Template Known Secondary structure														T	T	S									.	.	.	.	.			G	G	G									S					S	S						S	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	.	.	.	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A	T	P	E	E	T	R	G	S
Template Known Secondary structure						T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T									S					T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V	A	I	G	.	.	.	.	.	.	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.																																						.
Template Conservation																																																																											.
Template Sequence		D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	A	S	G	G	I	N	S	P	.	E	S	A	L	D	A
Template Known Secondary structure																					S										T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	S	S						S	S			S		.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.
		222	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	H	A
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions