Job Description P0AB74 Confidence 62.62% Date Thu Jan 5 11:14:47 GMT 2012 Rank 368 Aligned Residues 217 % Identity 15% Template c3gyeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, putative; PDBTitle: didydroorotate dehydrogenase from leishmania major Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		M	S	I	I	S	T	K	Y	L	L	Q	D	A	Q	A	N	G	Y	A	V	P	A	F	N	I	H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	.	.	.	.	.	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M
Query Conservation																																																											.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		G	V	M	C	T	T	T	E	E	L	V	A	M	T	E	S	A	S	G	S	L	V	S	K	S	C	T	P	A	.	.	.	.	.	.	.	L	R	E	G	N	P	T	P	R	Y	Q	A	L	P	L	G	S	I	N	S	M	G	L	P	N	N	G	F	D	F	Y	L	A	Y	A	A	E	Q	H	D	Y	G	K	K
Template Known Secondary structure		T	S	S		S	S										S	S		S									S	S	.	.	.	.	.	.	.		B			S		S							T	T										B													T			T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		P	L	A	L	H	L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	.	.	.	.	.	.	.	.	.	L	G	G	V	E	D	D	M	S
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	F	L	S	M	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	R	E	N	V	E	M	C	K	R	L	A	A	V	A	T	E	K	G	V	I	L	E	L	N	L	D	F	D	A	M	R	Q	C	L	T	A	V	S	E	V	Y	P	H	S	F
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																																												S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.																									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		V	D	A	E	S	A	F	L	T	D	P	.	.	.	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	.
Query Conservation													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		G	V	K	M	P	P	Y	F	D	F	A	H	F	D	A	A	A	E	I	L	N	E	F	P	K	V	Q	F	I	T	C	I	N	S	I	G	N	G	L	V	I	D	A	E	T	E	S	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	R	Y	V	L	P	T	A	L	A	N	I	N	A	F	Y	R	R	C	P
Template Known Secondary structure										S													T		T	T																		T	T	T	T			S		S	G	G	G	G						G	G	G	G																T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		G	K	L	I	F	G	C	G	G	V	Y	T	G	.	E	D	A	F	L	H	V	L	A	G	A	S	M	V	Q	V	G	T	A	L	Q	E	E	G	P	S	I	F	E	R	L	T	S	E
Template Known Secondary structure		T	S						S	S			S		.										T															T	T
Template Predicted Secondary structure															.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions