Job Description P0AB74 Confidence 97.52% Date Thu Jan 5 11:14:47 GMT 2012 Rank 51 Aligned Residues 224 % Identity 12% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																	.																																							.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																							.	.	.	.	.	.	.	.	.
Query Sequence		S	I	I	S	T	K	Y	L	L	Q	D	A	Q	A	N	.	G	Y	A	V	P	A	F	N	I	H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	.	.	.	.	.	.	.	.	.	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T
Query Conservation																	.																																							.	.	.	.	.	.	.	.	.
Alig confidence																	.																	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		P	M	V	T	A	A	T	S	L	R	R	A	L	E	N	P	D	S	F	I	V	A	P	G	V	Y	D	G	L	S	A	R	.	.	.	.	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N
Template Known Secondary structure																S	T	T										S						.	.	.	.				T	T	T		S														T	S	S		S	S	S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		72	.		.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure				.														.	.	.	.	.																					.	.	.	.	.
Query SS confidence				.														.	.	.	.	.																					.	.	.	.	.
Query Sequence		T	Y	.	N	M	P	L	A	L	H	L	D	H	H	E	S	.	.	.	.	.	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	.	.	.	.	.	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G
Query Conservation				.														.	.	.	.	.																					.	.	.	.	.
Alig confidence				.														.	.	.	.	.																					.	.	.	.	.																							.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		I	S	P	S	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	.	.	.	.	S	D	I	V	V	I	A	R
Template Known Secondary structure			S	T	T	S							T	T		S	S	S														T	T									B						B																					T	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	.	.	.	V	P	L	V	L	H	G	A	S	D	V	P	D	E	F
Query Conservation																																																																.	.	.
Alig confidence															.	.	.	.									.													.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation															.	.	.	.									.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	S	L	Q	T	H	G	Y	E	E	S	V	.	.	.	.	A	R	L	R	A	A	R	D	.	A	G	A	D	V	G	F	L	E	G	I	T	.	.	.	.	.	.	.	.	.	.	.	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S
Template Known Secondary structure															.	.	.	.									.		T		S					T	T			.	.	.	.	.	.	.	.	.	.	.												T	T	T	S		B						T	T	S	S	S
Template Predicted Secondary structure															.	.	.	.									.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.												.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	T	I	E	L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	G	P	A	V	A	A	M	R	E	A	M	E	K
Template Known Secondary structure									T		S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions