Job Description P0AB74 Confidence 97.99% Date Thu Jan 5 11:14:47 GMT 2012 Rank 32 Aligned Residues 211 % Identity 19% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		I	S	T	K	Y	L	L	Q	D	A	Q	A	N	G	Y	A	V	P	A	F	N	I	H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	.	.	.	.	.	.	.	.	.	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		I	S	A	G	A	K	F	R	A	A	V	A	A	E	Q	P	L	Q	V	V	G	A	I	T	A	Y	A	A	K	M	A	.	.	.	.	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N
Template Known Secondary structure															S	S	S							S	S								.	.	.	.			T	T		S																S		S	S	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		75	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.														110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	L	A	L	H	L	D	H	H	E	S	.	.	.	.	.	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G
Query Conservation														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																																																.	.
Template Sequence		L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	.	.
Template Known Secondary structure		S							T	T		S	S	S														T	T		S							B						T	T							B																		S		T	T	S						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	.	.	.	.	.	.	.	.	.	V	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.												.	.	.	.	.					.	.	.	.	.	.																	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	.	.	.	.	.	E	A	M	K	.	.	.	.	.	.	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T		S					.	.	.	.	.					.	.	.	.	.	.	S													S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
																				161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	H	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T	K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	M	N	K	A	A	L	N	F	Y	E	T
Template Known Secondary structure					T	T	S	S	S											T	T								S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions