Job Description P0AB74 Confidence 83.32% Date Thu Jan 5 11:14:47 GMT 2012 Rank 280 Aligned Residues 183 % Identity 21% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M	P	L	A	L	H	L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	.	.	.	.	A	G	V	R	S	A
Query Conservation																																																																								.	.	.	.
Alig confidence																															.	.	.	.	.																											.										.	.	.	.
Template Conservation																															.	.	.	.	.																											.
Template Sequence		L	N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	F	P	V	S	S	.	.	.	.	.	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	K	.	E	A	D	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I
Template Known Secondary structure																T	T	T		S							T	T	T		.	.	.	.	.												T	T			S	S								S		.												T	T		S	S
Template Predicted Secondary structure																															.	.	.	.	.																											.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query Sequence		M	I	D	G	S	H	F	P	F	.	.	.	.	.	.	.	.	.	.	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	.	.	.	E	L	T	G
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	G	I	G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G
Template Known Secondary structure								S							T	S	T	T			T	T	T	T														S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	T	T	T	S														T	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.															.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																				.	.	.	.										.	.
Query SS confidence																																				.	.	.	.										.	.
Query Sequence		V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	.	.	.	.	V	P	L	V	L	H	G	A	S	.	.	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T	K	V	N	V	A
Query Conservation																																				.	.	.	.										.	.
Alig confidence					.	.										.	.																			.	.	.	.										.	.
Template Conservation					.	.										.	.
Template Sequence		A	D	V	.	.	V	N	I	P	D	T	T	G	Y	.	.	X	L	P	W	Q	Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T
Template Known Secondary structure			S		.	.						S	S	S		.	.																		T	T	G	G	G	S							B		S	S	S											T	T	T							B
Template Predicted Secondary structure					.	.										.	.
Template SS confidence
		163	.	.			.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions