Job Description P0AB74 Confidence 95.99% Date Thu Jan 5 11:14:47 GMT 2012 Rank 107 Aligned Residues 149 % Identity 17% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G	S	H	.	.	.	.	.	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	.	N	K	R	I	P	V	I	A	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure		B															T	T							S	S	G	G	G	T	G	G	G	S																	.	T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80																		.
		156	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																													.	.	.	.	.
Query SS confidence											.	.	.																																													.	.	.	.	.
Query Sequence		D	P	Q	E	A	K	R	F	V	.	.	.	E	L	T	G	V	D	S	L	A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	D	V	P	L	V	L	H	.	.	.	.	.	G	A	S	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T
Query Conservation											.	.	.																																													.	.	.	.	.
Alig confidence											.	.	.																.	.	.																											.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		N	T	A	A	S	I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	I	T	P	Y	Y	.	.	.	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I
Template Known Secondary structure		S														T	T		S									S	.	.	.	S																	T			S												S												T	T	S	S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	V	A	T	E	L	K	I	A	F	A	G	A	V	K	A	W	F	A	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	V	K	E	A	S	G	N	I	S	Q	I	A	Q	I	K	A	L	C	G	D	K
Template Known Secondary structure								S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions