Job Description P0AB74 Confidence 59.12% Date Thu Jan 5 11:14:47 GMT 2012 Rank 380 Aligned Residues 149 % Identity 17% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	Q	A	N	G	Y	A	V	P	A	F	N	I	H	N	A	.	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M	P	L	A	L	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																	.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																		.	.	.	.	.	.	.
Template Sequence		S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	.	A	L	L	I	N	A	M	P	V	G	L	S	A	V	R	M	L	.	.	.	.	.	.	.	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L
Template Known Secondary structure						S	S												T	T												T	T			.																		.	.	.	.	.	.	.		T	T			S							T	T						S
Template Predicted Secondary structure																																				.																		.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	A	.	G	V	R	S	A	M	I	D	G	S	H	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E
Query Conservation																		.
Alig confidence																		.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	Y	G	I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	G	F	G	P	R	M	M	T	P	E	H	E	V	L	D	C	I	R	A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	A	A	T
Template Known Secondary structure		T	T	S															T		S							S	S	G	G	G																S		B	T	T	B									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.														360	.	.	.	.
		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	K	R	F	V	E	L	T	G	.	V	D	S	L	A	V	A	I	G	T	A	H	G
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	E	N	V	Y	R	K	V	G	S	A	D	F	G	F	V	P	G	R	G	V	F	G
Template Known Secondary structure											S	S							S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions