 |
Job Description | P0AB74 | Confidence | 66.44% | Date | Thu Jan 5 11:14:47 GMT 2012 |
Rank | 347 | Aligned Residues | 105 |
% Identity | 25% | Template | c2qvhB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:o-succinylbenzoate-coa synthase; |
PDBTitle: crystal structure of o-succinylbenzoate synthase complexed with o-2 succinyl benzoate (osb)
|
Resolution | 1.76 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | M | P | L | A | L | H | L | D | H | H | E | S | L | D | D | I | R | R | K | V | H | A | G | V | R | S | A | M | I | D | G | S | H | F | . |
. |
P | F | A | E | N | V | K | L | V | K | S | V | V | D | F | C | H | S | Q | D | C | S | V | E | A | E | L | G | R | L | G | G | V | E | D | D | M | S | V | D | A | E | S |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
| . | . |
|   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |
|
|
|
|   |
Template Sequence |   |
T | V | P | V | N | A | T | V | P | A | V | G | P | E | E | A | A | R | I | V | A | S | S | G | C | T | T | A | K | V | K | V | A | E | R | G | Q | S | E | A | N | D | V | A | R | V | E | A | V | R | D | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | R | G | R | V | R | I | D | V | N | G |
Template Known Secondary structure |   |
 |  |  | B |
|  |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |
|  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | L | T | D | P | Q | E | A | K | R | F | V | . |
. |
. |
E | L | T | G | V | D | S | L | A | V | A | I | G | T | A | H | G | L | Y | S | K | T | P | K | I | D | F | Q | R | L | A | E | I | R | E | V | V | D | V | P | L | V | L |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|   |   |
|
| . | . | . |   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . | . |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
A | W | . |
. |
D | V | D | T | A | V | R | X | I | R | L | L | D | R | F | E | L | E | Y | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | Q | P | C | A | T | V | D | E | L | A | E | V | R | R | R | V | S | V | P | I | A | A |
Template Known Secondary structure |   |
B | S | . | . |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
| B | S | S |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | |
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|