Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB74
Confidence96.49%DateThu Jan 5 11:14:47 GMT 2012
Rank85Aligned Residues123
% Identity22%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 





























...
Query SS confidence 












































































. . .
Query Sequence  DDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFV. . .
Query Conservation 
 
  

  









 

 



  
  

  

  

 





 


 
           

 



  

...
Alig confidence 





















....

























............












...
Template Conservation    
  
   

   

   
  ....       
  

  
  
   
    ............      
     
  
Template Sequence  TFVERAVKNGMDVFRVFDAMND. . . . VRNMQQALQAVKKMGAHAQGTLCYTT. . . . . . . . . . . . SPVHNLQTWVDVAQQL
Template Known Secondary structure  T



TT

....T



............
TT

Template Predicted Secondary structure 






....




............




Template SS confidence 















































































   104.....110.........120..... ....130.........140.........150. ........160.......
 
   165....170.... .....180.........190.........200......... 210.........220.........230..
Predicted Secondary structure 


..


















..








Query SS confidence 









. .


































. .






















Query Sequence  ELTGVDSLAV. . AIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHG. . ASDVPDEFVRRTIELGVTKVNVA
Query Conservation    



 


..



 

 
   
 

 
 
  
     






..


   
    

  

 



 
Alig confidence 









..



......
























..






















Template Conservation     


 
 
 

 
 ......  
  
  

  

    
 
  
 


 


 

 



 


  

 
Template Sequence  AELGVDSIALKDMAGI. . . . . . LTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTA
Template Known Secondary structure  TT
SSSS
......

S
S


TTS
TT
SB
Template Predicted Secondary structure 









......













Template SS confidence 







































































   168.170.........180... ......190.........200.........210.........220.........230...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions