 |
Job Description | P0AB74 | Confidence | 90.43% | Date | Thu Jan 5 11:14:47 GMT 2012 |
Rank | 214 | Aligned Residues | 111 |
% Identity | 22% | Template | c2e77B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:lactate oxidase; |
PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
|
Resolution | 1.90 Å |
|
 |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | P | Q | E | A | K | R | F | V | E | L | T | G | V | D | S | L | A | V | A | I | G | T | A | H | G | L | Y | S | K | T | P | K | I | D | F | Q | R | L | A | E | I | R | E | V | V | . |
. |
D | V | P | L | V | L | H | G | A | S | D | V | P | D | E | F | V | R | R | T | I | E | L | G | V | T | K | V | N | V | A |
Query Conservation |   |
|   |
|
|
|
|   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   | . | . |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |   | . |   |
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   | . | . |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|   |
| . |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
Q | H | P | E | D | A | D | M | A | I | K | . |
R | G | A | S | G | I | W | V | S | N | H | G | A | R | Q | L | Y | E | A | P | G | S | F | . |
. |
D | T | L | P | A | I | A | E | R | V | N | K | R | V | P | I | V | F | D | S | G | V | R | R | G | . |
E | H | V | A | K | A | L | A | S | G | A | D | V | V | A | L | G |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  | . | T | T |
| S |  |  |  |  |
|
| G | G | G | T | S | S | S | S |
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |
| S | S |
|
| S |  | . |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1244 | . | . | . | . | . | 1250 | . | . | . | . | |
. | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | |
|
. | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | |
. | . | . | . | . | . | . | 1310 | . | . | . | . | . | . | . | . | . |
  |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | L | K | I | A | F | A | G | A | V | K | A | W | F | A | E | N | P | Q | G | N | D | P | R | Y | Y | M | R | V | G | M | D | A | M | K | E | V | V | R | N | K | I | N | V | C | G | S | A | N |
Query Conservation |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
R | P | V | L | F | G | L | A | L | G | G | W | Q | G | A | Y | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | L | D | Y | F | Q | K | D | L | T | R | V | M | Q | L | T | G | S | Q | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | B |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1320 | . | . | . | . | . | . | . | . | . | 1330 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 1340 | . | . | . | . | . | . | . | . | . | 1350 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|