Job Description P0AB74 Confidence 96.57% Date Thu Jan 5 11:14:47 GMT 2012 Rank 83 Aligned Residues 191 % Identity 14% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	A	E	T	I	Q	A	I	L	E	V	C	S	E	M	R	S	P	V	I	L	A	G	T	P	G	T	F	K	H	I	A	L	E	E	I	Y	A	L	C	S	A	Y	S	T	T	Y	N	M	P	L	A	L	H	L	D	H	H	E	S	L	D	D	I	R	R	K	V	H	A	G	V	R	S	A	M	I	D	G
Query Conservation
Alig confidence																																																										.	.
Template Conservation																																																										.	.
Template Sequence		I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	.	.	V	P	N	Q	R	G	L	E	N	A	L	E	G	G	I	N	E	A	C	V	F	X
Template Known Secondary structure																T	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T							.	.			S											T		S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		106	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Query Sequence		S	H	.	.	.	.	.	.	.	.	.	.	F	P	F	A	E	N	V	K	L	V	K	S	V	V	D	F	C	H	S	Q	D	C	S	V	E	A	E	L	G	R	L	G	G	V	E	D	D	M	S	V	D	A	E	S	A	F	L	T	D	P	Q	E	A	K	R	F	V	.	.	.	E	L	T	G	V	D	S	L
Query Conservation				.	.	.	.	.	.	.	.	.	.																																																										.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.														.	.	.								.
Template Conservation																																																		.	.	.	.	.	.	.	.																								.
Template Sequence		S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	.	.	.	.	.	.	.	.	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G	I	S	E	.
Template Known Secondary structure			S	S						T	T	T		S																			T	T										T	T		B	T	T	.	.	.	.	.	.	.	.	T	B																		T		S		.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.																								.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																															.											.	.
Query SS confidence																															.											.	.
Query Sequence		A	V	A	I	G	T	A	H	G	L	Y	S	K	T	P	K	I	D	F	Q	R	L	A	E	I	R	E	V	V	.	D	V	P	L	V	L	H	G	A	S	.	.	D	V	P	D	E	F	V	R	R	T	I	E	L	G	V	T	K	V	N
Query Conservation																															.											.	.
Alig confidence		.										.	.																		.											.	.
Template Conservation		.										.	.
Template Sequence		.	L	S	L	G	D	T	I	G	A	.	.	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F	D
Template Known Secondary structure		.						S	S			.	.															T	T	S		G	G	G						B	G	G	G	S													T
Template Predicted Secondary structure		.										.	.
Template SS confidence
			174	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions