Job Description P76485 Confidence 3.64% Date Thu Jan 5 12:23:31 GMT 2012 Rank 45 Aligned Residues 42 % Identity 21% Template c2dmqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:lim/homeobox protein lhx9; PDBTitle: solution structure of the homeobox domain of lim/homeobox2 protein lhx9 Resolution UNK

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	R	P	L	L	S	L	E	D	F	F	I	D	N	N	I	H	G	S	I	C	C	N	V	I	P	E	Q	S	P	Q	A	I	Y	H	H	F	L	K	I	R	E	R	N	N	V	S	D	V	L	V	E	I	T	M	F	D	D	P	D	W	P	F	S	E	S	I	L	V	I	T	T	A	S	P	E	E	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	H	H	Q	L	R	T	M	K	S	Y	F	A	I	N	.	.	.	.	.	.	.	.	.	.	.	H	N	P	D	A	K	D	L	K	Q	L	A	Q	K	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	K	R	V	L
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	S	S													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.												30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																																.	.	.	.	50	.
		101	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	W	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	W	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions