Job Description P76485 Confidence 2.81% Date Thu Jan 5 12:23:31 GMT 2012 Rank 71 Aligned Residues 41 % Identity 22% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	R	P	L	L	S	L	E	D	F	F	I	D	N	N	I	H	G	S	I	C	C	N	V	I	P	E	Q	S	P	Q	A	I	Y	H	H	F	L	K	I	R	E	R	N	N	V	S	D	V	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	T	N	I	R	V	A	L	E	K	S	F	L	E	N	.	.	.	.	.	.	.	.	.	.	.	Q	K	P	T	S	E	E	I	T	M	I	A	D	Q	L	N	M	E	K	E	V	I	R	V	W
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	S	S														T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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