 |
Job Description | P0AEY5 | Confidence | 34.05% | Date | Thu Jan 5 11:24:38 GMT 2012 |
Rank | 93 | Aligned Residues | 62 |
% Identity | 16% | Template | c3o1hB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:periplasmic protein tort; |
PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao
|
Resolution | 3.10 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | I | L | I | I | N | G | A | K | K | F | A | H | S | N | G | Q | L | N | D | T | L | T | E | V | A | D | G | T | L | R | D | L | G | H | D | V | R | I | V | R | A | D | S | D | Y | D | V | K | A | E | V | Q | N | F | L | W | . |
. |
. |
. |
. |
A | D | V | V | I | W | Q | M | P |
Query Conservation |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . |
|
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|   |
|   |   | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |
Template Sequence |   |
E | K | I | C | A | I | Y | P | H | L | K | D | . |
. |
. |
. |
. |
S | Y | W | L | S | V | N | Y | G | M | V | S | E | A | E | K | Q | G | V | N | L | R | V | L | E | A | G | G | Y | P | N | K | S | R | Q | E | Q | Q | L | A | L | C | T | Q | W | G | A | N | A | I | I | L | G | T | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S |
|
|
| S | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|