Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEY5
Confidence99.89%DateThu Jan 5 11:24:38 GMT 2012
Rank18Aligned Residues154
% Identity18%Templatec3fvwA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40..... ....50.........60.........
Predicted Secondary structure 













............








Query SS confidence 











































. . . . . . . . . . . .























Query Sequence  SNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRAD. . . . . . . . . . . . SDYDVKAEVQNFLWADVVIWQMPG
Query Conservation 





 


    
   
   
              
      ............    
  
   
  

 

   
 
Alig confidence 










....















.











............























Template Conservation 



 
 

 
....  
 
  
        .    

    
   
                    
  

 

  

 
Template Sequence  KRILFIVGSFS. . . . EGSFNRQLAKKAETII. GDRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPV
Template Known Secondary structure 
S

S....TT
.TTSS


SS




GGGTTS


S


Template Predicted Secondary structure 




....



.


















Template SS confidence 















































































   3......10... ......20......... 30.........40.........50.........60.........70.......
 
   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  WWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYL
Query Conservation       

 

  



   
 

     
          
  


 

   
  
 
     
   
             
Alig confidence 





























..............



















................
Template Conservation 
       

  

                ..............   
        

  
   ................
Template Sequence  YNYAIPGPVKNLLDWLSRSLDLSDPTGPSV. . . . . . . . . . . . . . LQDKIVTVSSVANGAEVFED. . . . . . . . . . . . . . . .
Template Known Secondary structure  BTTB

TS
S
SS
TTS

T..............TTT
S




S................
Template Predicted Secondary structure 













..............





................
Template SS confidence 















































































   78.80.........90.........100....... ..110.........120.......
 
   150.........160.........170.... .....180.........190.
Predicted Secondary structure 









.......
Query SS confidence 
























. . . . . . .
















Query Sequence  PFHKANQFLGMEPLPTFIANDVIKM. . . . . . . PDVPRYTEEYRKHLVEI
Query Conservation           
               ....... 
           
   
Alig confidence  .























.......
















Template Conservation  .

  
       
                           
      
Template Sequence  . YRSLLPFIRXHLVDQLTGVPINSEAWSTGILKVSAEKLAELSAQADAL
Template Known Secondary structure  .TT







TT





Template Predicted Secondary structure  .


















Template SS confidence 
















































   131........140.........150.........160.........170........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions