Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence100.00%DateThu Jan 5 11:31:55 GMT 2012
Rank22Aligned Residues262
% Identity21%Templated2bgka1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKL
Query Conservation    
 

 






 


 


  

  
  


  
                     

                    
Alig confidence 















































































Template Conservation    
 









 


 


  
   

 


  
           
                               
Template Sequence  NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG
Template Known Secondary structure 
TTTT
STTSTT
S


TTT

TT
S
Template Predicted Secondary structure 





























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   82.......90.........100.........110.........120.........130.........140.........150.. .......160
Predicted Secondary structure 



















































.
Query SS confidence 






































































.







Query Sequence  DCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGG. GPLYTASK
Query Conservation                                                           
   
         .   
 


Alig confidence 






































































.







Template Conservation                                                           
   
             
 


Template Sequence  KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATK
Template Known Secondary structure 








SS
SSTTT

TGGGT


GGGT


TTS
Template Predicted Secondary structure 




























































Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   161........170...... ...180.........190.........200.........210.........220.........230.........
Predicted Secondary structure  .





































Query SS confidence 















.






























































Query Sequence  HAATGLIRQLAYELAP. KVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSR
Query Conservation            
     . 
 

 
 

 
 
                            

 
   
 


    

 
 
Alig confidence 















.

























.....































Template Conservation            
 
     
 

 
 

 
 
            .....             

   




  
  
 
 
Template Sequence  HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS. . . . . RVEELAHQAANLKGTLLRAEDVADAVAYLAGD
Template Known Secondary structure  GGGTS

S



TTSSS

.....T
SS
S



SG
Template Predicted Secondary structure 
























.....










Template SS confidence 















































































   172.......180.........190.........200.........210.... .....220.........230.........240......
 
   240.........250.........260.........
Predicted Secondary structure 





















Query SS confidence 





























Query Sequence  RNNRALSGVMINADAGLAIRGIRHVAAGLD
Query Conservation    
  


  
 



              
Alig confidence  .




























Template Conservation  . 
  


  
 



 
   
        
Template Sequence  . ESKYVSGLNLVIDGGYTRTNPAFPTALKH
Template Known Secondary structure  .GGTT

S
STTGGG

TS
S
Template Predicted Secondary structure  .



















Template SS confidence 





























   247..250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions