Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence99.95%DateThu Jan 5 11:31:55 GMT 2012
Rank176Aligned Residues212
% Identity19%Templated1yb1a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50 .........60.........70.......
Predicted Secondary structure 
















...

















Query SS confidence 

















































. . .


























Query Sequence  MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRF. . . GEHILAVEGNVTCYADYQRAVDQILTR
Query Conservation 
  
 

 






 


 


  

  
  


  
            ...         

                
Alig confidence 

















































...


























Template Conservation     
 

 






 


  

  
   

 

   
    
                   
                 
Template Sequence  RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE
Template Known Secondary structure 



TT
TTTSTT
S
TT



TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  SGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYT
Query Conservation                                                               
   
            
 
Alig confidence 























.....


















































Template Conservation                          .....                                    
            
 
Template Sequence  IGDVSILVNNAGVVYTSDLFATQD. . . . . PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAHVSVPFLLAYC
Template Known Secondary structure  T


S









GGG.....TTT







Template Predicted Secondary structure 























.....

































Template SS confidence 















































































   106...110.........120......... 130.........140.........150.........160.........170.........180
 
   158.160.........170.... .....180.........190.........200.........210.........220.........230...
Predicted Secondary structure  ....




































Query SS confidence 
















. . . .


























































Query Sequence  ASKHAATGLIRQLAYEL. . . . APKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPY
Query Conservation 


          
   ....   
 

 
 

 
 
                            

 
   
 


   
Alig confidence 
















....




















....................

















Template Conservation   

 
       

 

       



 
 

 
 
 
   ....................          




  
Template Sequence  SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN. . . . . . . . . . . . . . . . . . . . PSTSLGPTLEPEEVVNRL
Template Known Secondary structure  TT
TTT
STT
....................T




Template Predicted Secondary structure 









....................









Template SS confidence 















































































   182.......190.........200.........210.........220... ......230.........240.
 
   234...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  VMLT
Query Conservation   

 
Alig confidence 



Template Conservation      
Template Sequence  MHGI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   242...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions