 |
Job Description | P0CI31 | Confidence | 95.90% | Date | Thu Jan 5 11:31:55 GMT 2012 |
Rank | 446 | Aligned Residues | 88 |
% Identity | 16% | Template | d1gdha1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 2.40 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | D | L | H | N | E | S | I | F | I | T | G | G | G | S | G | L | G | L | A | L | V | E | R | F | I | E | E | G | A | Q | V | A | T | L | E | L | S | A | A | K | V | A | S | L | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | R | F | G | E | H | I | L | A | V | E | G | N | V | T | C | Y | A | D | Y | Q | R | A |
Query Conservation |   |
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|
|
|
|
|   |
|   | . |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|
Template Sequence |   |
G | E | K | L | D | N | K | T | L | G | I | Y | G | F | G | S | . |
I | G | Q | A | L | A | K | R | A | Q | G | F | D | M | D | I | D | Y | F | D | T | H | R | A | S | S | S | D | E | A | S | Y | Q | A | T | F | H | D | S | L | D | S | L | L | S | V | S | Q | F | F | S | L | N | A | P | S | T | P | E | T | R | Y | F |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |  |
|
| S |  | . |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  | T |
|  |  |
| S | S |  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
|
| T | T | T | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | Q | I | L | T | R | S | G | K | L | D | C | F | I | G | N | A | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
Template Sequence |   |
F | N | K | A | T | I | K | S | L | P | Q | G | A | I | V | V | N | T | A |
Template Known Secondary structure |   |
B | S |  |  |  |  | T | T | S |
| T | T |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|