Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence98.85%DateThu Jan 5 11:31:55 GMT 2012
Rank231Aligned Residues245
% Identity11%Templatec3slgB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pbgp3 protein; PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30 .........40.........50.........60.........70.........80...
Predicted Secondary structure 








.

























Query SS confidence 

























.




















































Query Sequence  HNESIFITGGGSGLGLALVERFIEEG. AQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDC
Query Conservation   

 






 


 


  

  
.  


  
                     

                      
Alig confidence 

























.


















..































Template Conservation 
 












  

  

  
   
    
           ..  
     

 
                    
Template Sequence  KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH. . ERMHFFEGDITINKEWVEYHVKKCDVILPLVA
Template Known Secondary structure 


S
SS


S

TTSGGGGGS..TT

TTT

S
B
Template Predicted Secondary structure 
















..
















Template SS confidence 















































































   2.......10.........20.........30.........40....... ..50.........60.........70.........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  FIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAA
Query Conservation                                                         
   
            
 


   
Alig confidence 




























































.

















Template Conservation                                         
                     .                  
Template Sequence  IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALT. YGPINKPRWIYACSKQLM
Template Known Secondary structure 



TTTTT


GGGGBS


SSB
TTT


B.


TT
GGG
Template Predicted Secondary structure 









































.








Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140 .........150........
 
   164.....170.........180.........190.........200.........210.........220.. .......230....
Predicted Secondary structure 

































.........


Query SS confidence 


























































. . . . . . . . .











Query Sequence  TGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQF. . . . . . . . . FPQPADFTGPYV
Query Conservation         
      
 

 
 

 
 
                            

 
.........   
 


    
Alig confidence 




...


















































.........











Template Conservation       ...                  
                                                     
Template Sequence  DRVIW. . . GYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM
Template Known Secondary structure  ...TTT

S
SS


TT

BS
S
TT

GGGG


Template Predicted Secondary structure  ...




































Template SS confidence 















































































   159160... ......170.........180.........190.........200.........210.........220.........230.....
 
   235....240.........250.....
Predicted Secondary structure 










Query SS confidence 




















Query Sequence  MLTSRRNNRALSGVMINADAG
Query Conservation 

 
   
  


  
 



Alig confidence 




















Template Conservation                       
Template Sequence  KIIENSNGVATGKIYNIGNPN
Template Known Secondary structure 
GGGTTTT

TT
Template Predicted Secondary structure 












Template SS confidence 




















   236...240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions