Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence100.00%DateThu Jan 5 11:31:55 GMT 2012
Rank112Aligned Residues258
% Identity16%Templatec3s55F_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative short-chain dehydrogenase/reductase; PDBTitle: crystal structure of a putative short-chain dehydrogenase/reductase2 from mycobacterium abscessus bound to nad
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.. .......60.........70.
Predicted Secondary structure 
















...........













Query SS confidence 

















































. . . . . . . . . . .


















Query Sequence  DLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGE. . . . . . . . . . . HILAVEGNVTCYADYQRAV
Query Conservation   
 

 






 


 


  

  
  


  
              ...........       

          
Alig confidence 

















































...........


















Template Conservation 

 


 





 


 


  

  

 


  
                                            
Template Sequence  DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL
Template Known Secondary structure 

TT
TTTST


S

TT
SS



TTT



TT
Template Predicted Secondary structure 






















Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  DQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGG
Query Conservation                                                                     
   
        
Alig confidence 















































































Template Conservation                                                                                  
Template Sequence  ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF
Template Known Secondary structure 
S








B
SS


TT


GGGSS

T
Template Predicted Secondary structure 






































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   152.......160.........170...... ...180.........190.........200... ......210.........220.....
Predicted Secondary structure 

.























.....












Query SS confidence 
























.


























. . . . .





















Query Sequence  GGPLYTASKHAATGLIRQLAYELAP. KVRVNGVGPCGMASDLRGPQALGQSET. . . . . SIMQSLTPEKIAAILPLQFFPQ
Query Conservation      
 


          
     . 
 

 
 

 
 
             .....               

 
   
Alig confidence 
























.


























.....





















Template Conservation        
                           

 
 
                                 
 

   
Template Sequence  AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK
Template Known Secondary structure  TBTGGGT
SB
STTTSS
TTSSS

TT
SSS
S
B
Template Predicted Secondary structure 







































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   226...230.........240.........250.........260.
Predicted Secondary structure 














Query SS confidence 



































Query Sequence  PADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGI
Query Conservation 
 


    

 
   
  


  
 



      
Alig confidence 













.




















Template Conservation 




  
 

 
 . 
  


  
 



 


  
Template Sequence  PEEVTRAVLFLVDE. ASSHITGTVLPIDAGATARMI
Template Known Secondary structure  SG.GGTT

S
STTGGGG

Template Predicted Secondary structure 
.










Template SS confidence 



































   244.....250....... ..260.........270........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions