Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence99.30%DateThu Jan 5 11:31:55 GMT 2012
Rank214Aligned Residues216
% Identity13%Templatec3rfxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  ESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIG
Query Conservation 
 






 


 


  

  
  


  
                     

                         
Alig confidence 



































......





































Template Conservation 
 







 

  
   
   
  
    
    ......           

 
             
         
Template Sequence  KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD. . . . . . PAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVE
Template Known Secondary structure  STTSTGGGSS


......


TT

TT
TT
S

S

S
Template Predicted Secondary structure 












......





















Template SS confidence 















































































   4.....10.........20.........30......... 40.........50.........60.........70.......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  NAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGL
Query Conservation                                                      
   
            
 


      
Alig confidence 




































...........































Template Conservation                                  
    ...........           
     
   
  

   
  
Template Sequence  KPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT. . . . . . . . . . . IGYYPQTERLGPDVPARPDGLAGVSKCFGENL
Template Known Secondary structure 

TTT

GGG...........GTTSBTTS
B
TT





S
Template Predicted Secondary structure 









...........

















Template SS confidence 















































































   78.80.........90.........100.........110.... .....120.........130.........140......
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  IRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALS
Query Conservation      
      
 

 
 

 
 
                            

 
   
 


    

 
   
  

Alig confidence 







..























......................














...





Template Conservation          ..

    

   
 
          ...................... 
   
 
      
...      
Template Sequence  ARMYFDKF. . GQETALVRIGSCTPEPNNYRMLST. . . . . . . . . . . . . . . . . . . . . . WFSHDDFVSLIEAVF. . . RAPVLG
Template Known Secondary structure  ..



B
SSS

STT......................B

...
S


Template Predicted Secondary structure  ..














......................


...




Template SS confidence 















































































   147..150.... .....160.........170........ .180.........190... ......
 
   247..250.........260......
Predicted Secondary structure 













Query SS confidence 



















Query Sequence  GVMINADAGLAIRGIRHVAA
Query Conservation 
  
 



           
Alig confidence 



















Template Conservation                     
Template Sequence  CPVVWGASANDAGWWDNSHL
Template Known Secondary structure  S




TT

B

GGG
Template Predicted Secondary structure 






Template SS confidence 



















   200.........210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions