Job Description P0CI31 Confidence 99.96% Date Thu Jan 5 11:31:55 GMT 2012 Rank 172 Aligned Residues 194 % Identity 26% Template c3qivA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier- PDBTitle: crystal structure of a putative short-chain dehydrogenase or 3-2 oxoacyl-[acyl-carrier-protein] reductase from mycobacterium3 paratuberculosis atcc baa-968 / k-10 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		D	L	H	N	E	S	I	F	I	T	G	G	G	S	G	L	G	L	A	L	V	E	R	F	I	E	E	G	A	Q	V	A	T	L	E	L	S	A	A	K	V	A	S	L	R	Q	R	F	.	.	.	G	E	H	I	L	A	V	E	G	N	V	T	C	Y	A	D	Y	Q	R	A	V	D	Q	I	L	T	R	S	G
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		R	F	E	N	K	V	G	I	V	T	G	S	G	G	G	I	G	Q	A	Y	A	E	A	L	A	R	E	G	A	A	V	V	V	A	D	I	N	A	E	A	A	E	A	V	A	K	Q	I	V	A	D	G	G	T	A	I	S	V	A	V	D	V	S	D	P	E	S	A	K	A	M	A	D	R	T	L	A	E	F	G
Template Known Secondary structure		T	T	T	T							T	T	T	S													T	T								S															T	T										T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	D	C	F	I	G	N	A	G	I	W	D	H	N	A	S	L	V	N	T	P	A	E	T	L	E	T	G	F	H	E	L	F	N	V	N	V	L	G	Y	L	L	G	A	K	A	C	A	P	A	L	I	A	S	E	G	S	M	I	F	T	L	S	N	A	A	W	Y	P	G	G	G	G	P	L	Y	T	A	S
Query Conservation
Alig confidence															.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	D	Y	L	V	N	N	A	A	I	F	G	.	.	G	M	K	L	D	F	L	L	T	I	D	P	E	Y	Y	K	K	F	M	S	V	N	L	D	G	A	L	W	C	T	R	A	V	Y	K	K	M	T	K	R	G	G	G	A	I	V	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	A
Template Known Secondary structure															.	.	G	G	G	G	G		T	T	T	S																															T								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.														.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		K	H	A	A	T	G	L	I	R	Q	L	A	Y	E	L	A	P	.	K	V	R	V	N	G	V	G	P	C	G	M	A	S	D	L	R	G	P	Q	A	L	G	Q	S	E	T	S	I	M	Q	S	L	T	P	E	K	I	A	A	I	L	P	L	Q	F	F	P	Q	P	A	D	F	T	G	P	Y	V	M	L	T	S
Query Conservation																			.
Alig confidence																			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	I	N	G	L	T	Q	Q	L	S	R	E	L	G	G	R	N	I	R	I	N	A	I	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	L	V	G	M	C	L	F	L	L	S
Template Known Secondary structure																T	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																																									.	.	.	.	190	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	N	N	R	A	L	S	G	V	M	I	N	A
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		D	.	E	A	S	W	I	T	G	Q	I	F	N	V
Template Known Secondary structure		G	.	G	G	T	T			S
Template Predicted Secondary structure			.
Template SS confidence
		229		230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions