Job Description P0CI31 Confidence 100.00% Date Thu Jan 5 11:31:55 GMT 2012 Rank 149 Aligned Residues 239 % Identity 20% Template c3ioyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: structure of putative short-chain dehydrogenase (saro_0793)2 from novosphingobium aromaticivorans Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		L	H	N	E	S	I	F	I	T	G	G	G	S	G	L	G	L	A	L	V	E	R	F	I	E	E	G	A	Q	V	A	T	L	E	L	S	A	A	K	V	A	S	L	R	Q	R	F	.	.	.	.	G	E	H	I	L	A	V	E	G	N	V	T	C	Y	A	D	Y	Q	R	A	V	D	Q	I	L	T	R	S	G
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.
Template Conservation
Template Sequence		F	A	G	R	T	A	F	V	T	G	G	A	N	G	V	G	I	G	L	V	R	Q	L	L	N	Q	G	C	K	V	A	I	A	D	I	R	Q	D	S	I	D	K	A	L	A	T	L	E	A	E	S	G	P	E	V	M	G	V	Q	L	D	V	A	S	R	E	G	F	K	M	A	A	D	E	V	E	A	R	F	G
Template Known Secondary structure			T	T							T	T	T	S	T											T	T	T								S														T				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		K	L	D	C	F	I	G	N	A	G	I	W	D	H	N	A	S	L	V	N	T	P	A	E	T	L	E	T	G	F	H	E	L	F	N	V	N	V	L	G	Y	L	L	G	A	K	A	C	A	P	A	L	I	A	.	.	.	.	.	.	.	S	E	G	S	M	I	F	T	L	S	N	A	A	W	Y	P	G	G	G
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		P	V	S	I	L	C	N	N	A	G	V	N	L	F	Q	P	I	E	E	S	S	Y	.	.	.	.	.	D	D	W	D	W	L	L	G	V	N	L	H	G	V	V	N	G	V	T	T	F	V	P	R	M	V	E	R	V	K	A	G	E	Q	K	G	G	H	V	V	N	T	A	S	M	A	A	F	L	A	A	G	S
Template Known Secondary structure																		G	G	G				.	.	.	.	.											T																				T	T	S												G	G	G	T				S	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	P	L	Y	T	A	S	K	H	A	A	T	G	L	I	R	Q	L	A	Y	E	L	A	P	.	K	V	R	V	N	G	V	G	P	C	G	M	A	S	D	L	R	G	P	Q	A	L	G	Q	S	E	T	S	I	M	Q	S	L	T	P	E	K	I	A	A	I	L	P	L	Q	F	F	P	Q	P	A	D	F	T	G
Query Conservation																										.
Alig confidence																										.																											.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		P	G	I	Y	N	T	T	K	F	A	V	R	G	L	S	E	S	L	H	Y	S	L	L	K	Y	E	I	G	V	S	V	L	C	P	G	L	V	K	H	E	F	G	M	E	P	D	V	I	G	A	R	.	.	.	.	.	V	I	E	A	M	K	A	N	R	L	H	I	F	S	H	P	D	H	K	E	E	L	R	E
Template Known Secondary structure		T																						G	G	G	T											B				S	S	B									.	.	.	.	.								T		S						G	G	G
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	V	M	L	T	S	R	R	N	N	R	A	L	S	G	V	M	I	N	A	D	A	G	L	A	I	R
Query Conservation
Alig confidence										.						.	.	.	.	.	.
Template Conservation										.						.	.	.	.	.	.
Template Sequence		V	F	D	E	I	I	A	E	.	Y	Q	D	Y	P	.	.	.	.	.	.	K	D	P	G	Y	D	Q	R
Template Known Secondary structure									T	.						.	.	.	.	.	.			T	T
Template Predicted Secondary structure										.						.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.		.	.	.	.	.							280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions