Job Description P0CI31 Confidence 98.83% Date Thu Jan 5 11:31:55 GMT 2012 Rank 232 Aligned Residues 212 % Identity 10% Template c3h2sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19. Resolution 1.78 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	F	I	T	G	G	G	S	G	L	G	L	A	L	V	E	R	F	I	E	E	G	A	Q	V	A	T	L	E	L	S	A	A	K	V	A	S	L	R	Q	R	F	G	E	H	I	L	A	V	E	G	N	V	T	C	Y	A	D	Y	Q	R	A	V	D	Q	I	L	T	R	S	G	K	L	D	C	F	I	G
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	A	V	L	G	A	T	G	R	A	G	S	A	I	V	A	E	A	R	R	R	G	H	E	V	L	A	V	V	R	D	P	Q	K	A	A	D	R	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	T	V	A	T	L	V	K	E	P	L	V	L	T	E	A	D	L	D	S	V	D	A	V	V	D
Template Known Secondary structure								T	T	T	S													T	T								S									.	.	.	.	.	.	.	.	.	.	.	.	T		T	T	S							G	G	G							T	T		S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40													.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	I	W	D	H	N	A	S	L	V	N	T	P	A	E	T	L	E	T	G	F	H	E	L	F	N	V	N	V	L	G	Y	L	L	G	A	K	A	C	A	P	A	L	I	A	S	E	G	S	M	I	F	T	L	S	N	A	A	W	Y	P	G	G	G	G	P	L	Y	T	A	S	K	H	A	A	T	G	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		A	L	S	V	P	W	G	S	G	R	G	Y	L	H	L	D	F	A	T	H	L	V	S	L	L	R	N	S	D	T	L	A	V	F	I	L	G	S	A	S	.	.	.	.	.	.	.	L	A	X	P	G	A	D	H	P	X	I	L	D	F	P	E	S	A	A	S	Q	P	W	Y	D	G	A	L	Y	Q	Y	Y	E
Template Known Secondary structure							T	T	S	S		T													T		T	T											G	G	G	.	.	.	.	.	.	.	S	B		T	T		S	S		G	G	G	G			G	G	G	G	G	S	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	L	A	Y	E	L	A	P	K	V	R	V	N	G	V	G	P	C	G	M	A	S	D	L	R	G	P	Q	A	L	G	Q	S	E	T	S	I	M	Q	S	L	T	P	E	K	I	A	A	I	L	P	L	Q	F	F	P	Q	P	A	D	F	T	G	P	Y	V	M	L	T	S	R	R	N	N	R	A	L	S
Query Conservation
Alig confidence								.	.																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation								.	.																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		Y	Q	F	L	Q	X	.	.	N	A	N	V	N	W	I	G	I	S	P	S	E	A	F	P	S	G	P	A	T	S	Y	V	A	G	K	D	T	L	L	V	G	E	D	G	.	.	.	.	.	.	.	.	.	.	Q	S	H	I	T	T	G	N	X	A	L	A	I	L	D	Q	L	.	.	.	E	H	P	T	A	I
Template Known Secondary structure						T	T	.	.		T	T	S									S	B													S	S	B					T	T	S	.	.	.	.	.	.	.	.	.	.			B															.	.	.		S				T
Template Predicted Secondary structure								.	.																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		142	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.
		247	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	M	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	R	I	V	V
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions