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Job DescriptionP0CI31
Confidence100.00%DateThu Jan 5 11:31:55 GMT 2012
Rank78Aligned Residues234
% Identity23%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50 .........60.........70.........
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Query Sequence  DLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRF. . . GEHILAVEGNVTCYADYQRAVDQILTRSG
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Template Sequence  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG
Template Known Secondary structure  TTTT
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SSTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  KLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTAS
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Template Sequence  ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTN. . . . LKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAA
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GGG

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   84.....90.........100.........110..... ....120.........130.........140.........150.........
 
   160.........170...... ...180.........190.........200.........210.........220.........230........
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Query Sequence  KHAATGLIRQLAYELAP. KVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTS
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Template Sequence  KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLAS
Template Known Secondary structure  GGGT

SB




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   160.........170.........180.........190..... ....200.........210.........220..
 
   239240.........250........
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Query Sequence  RRNNRALSGVMINADAGLAI
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Template Sequence  P. QAGYITGTTLHVNGGMFM
Template Known Secondary structure  G.GGTT

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   230 .........240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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