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Job DescriptionP0CI31
Confidence98.16%DateThu Jan 5 11:31:55 GMT 2012
Rank276Aligned Residues186
% Identity18%Templatec2zklA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  SIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGN
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Template Sequence  NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . LKADFIVHL
Template Known Secondary structure  TTTS



TT

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   2.......10.........20.........30.........40.... .....50...
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  AGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLI
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Template Sequence  AG. . . . . . . . . . . . . . . . . . . . . . . . . VFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNP. . YGESKLQGEQLL
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   54. ....60.........70.........80.........90.... .....100......
 
   168.170.........180.........190.........200.........210.........220 .........230.........
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Query Sequence  RQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPL. . . . . . . . QFFPQPADFTGPYVMLTSR
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Template Sequence  REYAE. . EYGNTVYIYRWPNLF. . . . . . GKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAI. .
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   115.... 120.........130.... .....140.........150.........160.........170.........180....
 
   240.........250........
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Query Sequence  RNNRALSGVMINADAGLAI
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Template Sequence  EGTPTIENGVPTVPNVFKV
Template Known Secondary structure  TT


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   185....190.........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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