Job Description P0CI31 Confidence 99.44% Date Thu Jan 5 11:31:55 GMT 2012 Rank 207 Aligned Residues 237 % Identity 18% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure													.																			.																				.	.	.	.	.	.	.
Query SS confidence													.																			.																				.	.	.	.	.	.	.
Query Sequence		D	L	H	N	E	S	I	F	I	T	G	.	G	G	S	G	L	G	L	A	L	V	E	R	F	I	E	E	G	A	.	Q	V	A	T	L	E	L	S	A	A	K	V	A	S	L	R	Q	R	F	.	.	.	.	.	.	.	G	E	H	I	L	A	V	E	G	N	V	T	C	Y	A	D	Y	Q	R	A	V	D	Q
Query Conservation													.																			.																				.	.	.	.	.	.	.
Alig confidence													.																			.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F
Template Known Secondary structure				T	T							S			S	S	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
		74	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		I	L	T	R	S	G	K	.	.	.	.	.	.	L	D	C	F	I	G	N	A	G	I	W	D	H	N	A	S	L	V	N	T	P	A	E	T	L	E	T	G	F	H	E	L	F	N	V	N	V	L	G	Y	L	L	G	A	K	A	C	A	P	A	L	I	A	S	E	G	S	M	I	F	T	L	S	N	A	A	W
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G
Template Known Secondary structure				S		T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	G	G	G	G	P	L	Y	T	A	S	K	H	A	A	T	G	L	I	R	Q	L	A	Y	E	L	A	P	K	V	R	V	N	G	V	G	P	C	G	M	A	S	D	L	R	G	P	Q	A	L	G	Q	S	E	T	S	I	M	Q	S	L	T	P	E	K	I	A	A	I	L	P	L	Q	F	F	P	Q	P	A
Query Conservation
Alig confidence					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		T	F	G	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	G	W	T	R	G	T	N	N	I	I	A	E	G	I	E	K	M	G	V	R	T	F	S	.	Q	K
Template Known Secondary structure			S	S	.		B	T	T								G	G	G								S	S		T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T						T	T	T		B				.
Template Predicted Secondary structure					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		832	.	.		.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.																.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.		.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	F	T	G	P	Y	V	M	L	T	S	R	R	N	N	R	A	L	S	G	V	M	I	N	A	D	.	.	A	G	L
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		E	M	A	F	N	L	L	G	L	L	T	P	E	V	V	E	L	C	Q	K	S	P	V	M	A	D	L	N	G	G	L
Template Known Secondary structure									G	G	G	S										S							S	B	S	T
Template Predicted Secondary structure
Template SS confidence
		900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions