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Job DescriptionP0CI31
Confidence99.95%DateThu Jan 5 11:31:55 GMT 2012
Rank180Aligned Residues223
% Identity17%Templatec2qq5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50 .........60.........70........
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Query Sequence  SDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRF. . . GEHILAVEGNVTCYADYQRAVDQILTRS
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Template Sequence  APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
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Query Sequence  GKLDCFIGNAG. . . IWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPL
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Template Sequence  QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP
Template Known Secondary structure  TT





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Query Sequence  YTASKHAATGLIRQLAYELAP. KVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYV
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Template Sequence  YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLSSAE. . . . . . . . . . . . . . . . . . . . . . . . . . . TTELSGKCVV
Template Known Secondary structure  GGGT



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   163......170.........180.........190.........200..... ....210.....
 
   235....240.........250.
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Query Sequence  MLTSRRNNRALSGVMIN
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Template Sequence  ALATDPNILSLSGKVLP
Template Known Secondary structure  T
TTGGGGTT
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   238.240.........250....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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