Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence100.00%DateThu Jan 5 11:31:55 GMT 2012
Rank42Aligned Residues252
% Identity24%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGK
Query Conservation 
  
 

 






 


 


  

  
  


  
                     

                   
Alig confidence 






































........
































Template Conservation     
 

 






 


 


  
   

 
    
 ........            
                    
Template Sequence  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHIFKEYGS
Template Known Secondary structure 
GGGTT
T
SSTT
SS........


S
SS

TT
S
Template Predicted Secondary structure 















........























Template SS confidence 















































































   2.......10.........20.........30.........40 .........50.........60.........70...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  LDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
Query Conservation                                                            
   
            
 


Alig confidence 






























....












































Template Conservation                                 ....                       
  

               

Template Sequence  ISVLVNNAGIESYGKIESMSMGEWRRIIDVN. . . . LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK
Template Known Secondary structure 








B
TTTS
....TTTSSS


GGGTS

TTB
Template Predicted Secondary structure 






























....

























Template SS confidence 















































































   74.....80.........90.........100.... .....110.........120.........130.........140.........
 
   161........170.........180.........190......... 200.........210.........220.........230.........
Predicted Secondary structure 






















.














Query SS confidence 






































.







































Query Sequence  HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALG. QSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSR
Query Conservation            
      
 

 
 

 
 
         .                   

 
   
 


    

 
 
Alig confidence 






































.







































Template Conservation            
 
    
 
  
 

 
 
                             
  
   
 


  
 

 
 
Template Sequence  HAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR
Template Known Secondary structure  TTTS
SBSS
S
STTSS
B
SG
Template Predicted Secondary structure 



























Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210.........220.........
 
   240.........250.........260.....
Predicted Secondary structure 

















Query SS confidence 

























Query Sequence  RNNRALSGVMINADAGLAIRGIRHVA
Query Conservation    
  


  
 



          
Alig confidence  .
























Template Conservation  .    


  
 



          
Template Sequence  . EASFITGTCLYVDGGLSIRAPISTP
Template Known Secondary structure  .GGTT

S
STTGGG

S



Template Predicted Secondary structure  .
















Template SS confidence 

























   230.........240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions