Return to main results Retrieve Phyre Job Id

Job DescriptionP0CI31
Confidence95.60%DateThu Jan 5 11:31:55 GMT 2012
Rank474Aligned Residues74
% Identity19%Templatec2bmaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30....... ..40......... 50
Predicted Secondary structure 











...........

.....................
Query SS confidence 


































. . . . . . . . . . .











. . . . . . . . . . . . . . . . . . . . .
Query Sequence  DLHNESIFITGGGSGLGLALVERFIEEGAQVATLE. . . . . . . . . . . LSAAKVASLRQR. . . . . . . . . . . . . . . . . . . . . F
Query Conservation   
 

 






 


 


  

  
  


  ...........
           ..................... 
Alig confidence 











.





















...........











.....................
Template Conservation   
 
  




 .



   
  
   








  
 



 


   
           
              
 
Template Sequence  PVEKQTAVVSGS. GNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFP
Template Known Secondary structure 
GGG

S.STT

TT
SS


TTTT

GGGGGGT
SS

S
Template Predicted Secondary structure 





.
































Template SS confidence 















































































   227..230........ .240.........250.........260.........270.........280.........290.........300.....
 
   51........60.........70.......
Predicted Secondary structure 

















Query SS confidence 


























Query Sequence  GEHILAVEGNVTCYADYQRAVDQILTR
Query Conservation           

                
Alig confidence 


























Template Conservation      
    






    

  

 
Template Sequence  NEKPWGVPCTLAFPCATQNDVDLDQAK
Template Known Secondary structure  S

TTSS

S
SSTT
B
S
Template Predicted Secondary structure 













Template SS confidence 


























   306...310.........320.........330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions