Job Description P39353 Confidence 95.42% Date Thu Jan 5 11:59:42 GMT 2012 Rank 379 Aligned Residues 79 % Identity 22% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.												.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																																		.	.												.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	.	.	.	.	.	.	.	.	.	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	.	.
Query Conservation																																		.	.												.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																																		.	.												.	.	.	.	.	.	.	.	.															.	.									.	.
Template Conservation																																																																						.	.
Template Sequence		N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	A	G	.	.	S	K	L	V	V	I	T	A	G	A
Template Known Secondary structure		S								S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	T	T	.	.		S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.
					69	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	P	N	Y	L	H	K	E	P	V	I	K	A	A	K
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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