Job Description P39353 Confidence 96.09% Date Thu Jan 5 11:59:42 GMT 2012 Rank 334 Aligned Residues 105 % Identity 20% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.
Predicted Secondary structure																																.																																												.	.	.
Query SS confidence																																.																																												.	.	.
Query Sequence		N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	.	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	.	.	.	P	V	I
Query Conservation																																.																																												.	.	.
Alig confidence																																.																											.	.																.	.	.
Template Conservation																																																											.	.
Template Sequence		P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	.	.	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V	S	D
Template Known Secondary structure		S							S													T	T									S							T			S	S						G	G	G							T	.	.		S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		K	A	A	K	N	K	K	H	V	F	.	.	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G
Query Conservation												.	.
Alig confidence												.	.					.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	.	.	.	.	.	.	.	.	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K
Template Known Secondary structure					T	T		S						S	S	S		.	.	.	.	.	.	.	.											T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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