Job Description P39353 Confidence 95.26% Date Thu Jan 5 11:59:42 GMT 2012 Rank 387 Aligned Residues 119 % Identity 13% Template c3o8qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.													.	.	.
Query SS confidence																																.													.	.	.
Query Sequence		N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	.	D	P	E	N	G	E	N	I	A	R	E	L	.	.	.	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I
Query Conservation																																.													.	.	.
Alig confidence																																.													.	.	.																	.	.	.
Template Conservation																																																																.	.	.
Template Sequence		T	I	L	L	I	G	A	G	G	A	A	R	G	V	L	K	P	L	L	D	Q	Q	P	A	S	I	T	V	T	N	R	T	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	E	V	K	A	Q	A	F	E	Q	L	K	Q	S	Y	D	.	.	.	V	I	I	N	S	T	S	G	E	L	P	A	I	D	P
Template Known Secondary structure									S												T	T			S							S	S											T	G	G	G	S							G	G	G			S			S	.	.	.															G
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		79	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure												.	.																									.
Query SS confidence												.	.																									.
Query Sequence		K	A	A	K	N	K	K	H	V	F	.	.	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	.	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R
Query Conservation												.	.																									.
Alig confidence												.	.									.	.	.	.	.	.											.
Template Conservation																						.	.	.	.	.	.
Template Sequence		V	I	F	S	S	R	S	V	C	Y	D	M	M	Y	G	K	G	Y	T	V	.	.	.	.	.	.	F	N	Q	W	A	R	Q	H	G	C	A	Q	A	I	D	G	L	G	M	L	V	G	Q	A	A	E	S	F	M
Template Known Secondary structure		G	G			T	T						S				S	S				.	.	.	.	.	.								T	T		S					T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions