Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 4 Aligned Residues 350 % Identity 20% Template c3moiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of the putative dehydrogenase from bordetella2 bronchiseptica rb50 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																			.	.
Query SS confidence																.																			.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	.	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	.	.	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I
Query Conservation																.																			.	.
Alig confidence																.																			.	.
Template Conservation
Template Sequence		I	R	F	G	I	C	G	L	G	F	A	G	S	V	L	M	A	P	A	M	R	H	H	P	D	A	Q	I	V	A	A	C	D	P	N	E	D	V	R	E	R	F	G	K	E	Y	G	I	P	V	F	A	T	L	A	E	M	M	Q	H	V	Q	M	D	A	V	Y	I	A	S	P	H	Q	F	H	C	E	H	V	V
Template Known Secondary structure										S					T	T									T	T									S													T					S	S								S			S						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	S	E	Q	G	L	H	I	I	V	E	K	P	L	T	L	S	R	D	E	A	D	R	M	I	E	A	V	E	R	A	G	V	H	L	V	V	G	T	S	R	S	H	D	P	V	V	R	T	L	R	A	I	V	Q	E	G	S	V	G	R	V	S	M	L	N	C	F	N	Y	T	D	F	L	Y	R	P	R	R
Template Known Secondary structure						T	T							S				S																T									G	G	G	S														T	T														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		S	W	K	K	M	K	E	Q	S	G	G	H	L	.	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A	F	N	W	P	E
Query Conservation															.
Alig confidence															.																																		.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		P	E	E	L	D	T	S	K	G	G	G	I	I	Y	N	Q	L	P	H	Q	I	D	S	I	K	T	I	T	G	Q	R	I	T	A	V	R	A	M	T	G	R	L	D	P	K	R	P	.	.	.	.	T	E	G	N	C	A	A	M	L	T	L	E	D	G	A	C	A	V	M	V	Y	S	G	Y	D	H	F	D	S
Template Known Secondary structure		G	G	G	G		G	G	G	T		S					T																												T	T	S		.	.	.	.	S											T	T	S										S	S	S	S		G
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																									.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	V	I	I	N	G	T	K	G	S	I	K	I	D	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	M	H	F	W	L	A	E	G	G	R	A	K	Q	P	N	H	G	G	A	R	K	V	L	R	Q	L	E	G	D	E	A	E	L	R	R	S	R	Y	G	F	G	G	P	I	S	K	S	D	R	K	Q	P	H	F	G	V	M	L	V	T	C	E	H	A	D	L	R	A	S	P	E	G	V	L	V	Y	G	D
Template Known Secondary structure		G	G	G	T	T	T	B		T	T	S	S	B					S	S											S											S	T	T	S	T	T											S							S	S							S	S							T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R	K	E	T	L	F	L	H	N	I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	K	V	K
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		E	G	V	R	E	V	P	A	I	T	G	R	G	P	F	S	Q	G	D	T	I	D	E	L	R	D	A	I	A	G	V	A	P	A	.	.	.	.	.	.	L	R	D	A	R	W	G	K	D	T	L	E	V	C	L	A	V	L	E	S	S	A	T	G	R	Q	V	E
Template Known Secondary structure		T											S	S	S	T														T	T	S	S			.	.	.	.	.	.	S	S																						S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.							.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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