Job Description P39353 Confidence 99.44% Date Thu Jan 5 11:59:42 GMT 2012 Rank 71 Aligned Residues 106 % Identity 18% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.																			.	.											.	.
Query SS confidence																						.																			.	.											.	.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	.	M	H	D	N	A	K	I	T	C	V	Y	D	P	E	N	G	E	N	.	.	I	A	R	E	L	Q	C	I	N	M	.	.	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P
Query Conservation																						.																			.	.											.	.
Alig confidence																						.																			.	.											.	.
Template Conservation
Template Sequence		T	N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	G	K	T	T	E	D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	T	A	I	L	T	V	P	S	T	E	A	Q	E	V
Template Known Secondary structure										S								T	S		G	G	G	T	S	S										T	T	S	T	T	T	T	S	B		T	T	S		B				G	G	G					T	S	S	S									S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		77	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.
Predicted Secondary structure										.																.	.	.	.	.	.	.	.	.
Query SS confidence										.																.	.	.	.	.	.	.	.	.
Query Sequence		V	I	K	A	A	K	N	K	.	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	.	.	.	.	.	.	.	.	.	C	V	D	M	V	K	A	C
Query Conservation										.																.	.	.	.	.	.	.	.	.
Alig confidence										.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	I	L	V	K	A	G	I	K	G	I	L	S	F	S	P	V	H	L	T	L	P	K	D	I	I	V	Q	Y	V	D	L	T	S	E	L	Q	T	L	L
Template Known Secondary structure								T	T								S	S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions