Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 14 Aligned Residues 343 % Identity 20% Template c3gfgB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:uncharacterized oxidoreductase yvaa; PDBTitle: structure of putative oxidoreductase yvaa from bacillus subtilis in2 triclinic form Resolution 2.59 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	.	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	P	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		I	K	V	G	I	L	G	Y	G	L	S	G	S	V	F	H	G	P	L	L	D	V	L	D	E	Y	Q	I	S	K	I	M	T	S	R	T	E	E	V	K	R	D	F	P	D	A	E	V	V	H	E	L	E	E	I	T	N	D	P	A	I	E	L	V	I	V	T	T	P	S	G	L	H	Y	E	H	T	M	A	C
Template Known Secondary structure										S						T	T								T	T									S										T	T						S	T					T		T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R	L	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	A	G	K	H	V	V	M	E	K	P	M	T	A	T	A	E	E	G	E	T	L	K	R	A	A	D	E	K	G	V	L	L	S	V	Y	H	N	R	R	W	D	N	D	F	L	T	I	K	K	L	I	S	E	G	S	L	E	D	I	N	T	Y	Q	V	S	Y	N	R	Y	R	P	E	V	Q	A	R	W	R
Template Known Secondary structure				T	T							S	S			S	S															T								G	G	G	G	S												T	T	S	S		S											B			S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A	F	N	W	P	E	H	Y	V
Query Conservation
Alig confidence																													.															.	.	.	.																							.
Template Conservation																													.															.	.	.	.																							.
Template Sequence		E	K	E	G	T	A	T	G	T	L	Y	D	L	G	S	H	I	I	D	Q	T	L	H	L	F	G	M	.	P	K	A	V	T	A	N	V	M	A	Q	R	E	N	.	.	.	.	A	E	T	V	D	Y	F	H	L	T	L	D	Y	G	K	L	Q	A	I	L	Y	G	.	G	S	I	V	P	A	N	G	P	R	Y
Template Known Secondary structure					S	S	S		S					T															.		S										S	T	T	.	.	.	.			S											T	T								.		S	B		S	S				S
Template Predicted Secondary structure																													.															.	.	.	.																							.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R	K	E	T	L	F	L	H	N
Query Conservation
Alig confidence																												.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		Q	I	H	G	K	D	S	S	F	I	K	Y	G	I	D	G	Q	E	D	A	L	R	A	G	R	K	.	.	.	.	.	.	.	P	E	D	D	S	W	G	A	D	V	P	E	F	Y	G	K	L	T	T	I	R	G	S	D	K	K	T	E	T	I	P	S	V	N	G	S	Y	L	T	Y	Y	R	K	I	A	E	S
Template Known Secondary structure						S	S										S							T	T			.	.	.	.	.	.	.			S	T	T	T	T				G	G	G									T	T														T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	K	V	K	I	S
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		I	R	E	G	A	A	L	.	.	.	.	.	.	P	V	T	A	E	E	G	I	N	V	I	R	I	I	E	A	A	M	E	S	S	K	E	K	R	T	I	M	L	E
Template Known Secondary structure									.	.	.	.	.	.	S	S																						T	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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