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Job DescriptionP39353
Confidence100.00%DateThu Jan 5 11:59:42 GMT 2012
Rank16Aligned Residues333
% Identity19%Templatec3fhlC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from bacteroides2 fragilis nctc 9343
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MINYGVVGVGYFGAE. LARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIK
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Template Sequence  IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGM
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GGGTT
TTSS
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Query Sequence  AAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLS
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Template Sequence  ALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVEYESTFARYRNFI. . . .
Template Known Secondary structure  TT
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SST


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Query Sequence  WKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPS. . . GKLATLEWGSAFNWP
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Template Sequence  . . . . . . . GGLTYNLGSHLIDQAIQLFGM. PEAVFADLGILREGG. . . . KVDDYFIIHLLHPSLAPNVKITLKASYLMREA
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   171........180.........190. ........200...... ...210.........220.........230........
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  EHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETL
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Template Sequence  EPRFALHGTLGSYVKYGVDKQEAALLAGEI. . . . . . . PERPNWGEESEQEWGLLHTEINGKEICRKYPGIAGNYGGFYQN
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SSS

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   317..320.........330.........340.........350.........360..
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Query Sequence  FLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKI
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Template Sequence  IYEHLCLGQPL. . . . . . ETHAQDILNVIRIIEAAYQSHRENKIVNL
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   312.......320.. .......330.........340.........350.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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