Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 28 Aligned Residues 342 % Identity 17% Template c3fd8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis Resolution 2.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.																				.	.											.
Query SS confidence																.																				.	.											.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	.	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	P	.	.	E	N	G	E	N	I	A	R	E	L	.	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V
Query Conservation																.																				.	.											.
Alig confidence																.																				.	.											.
Template Conservation
Template Sequence		V	K	X	G	F	I	G	F	G	K	S	A	N	R	Y	H	L	P	Y	V	X	I	R	E	T	L	E	V	K	T	I	F	D	L	H	V	N	E	K	A	A	A	P	F	K	E	K	G	V	N	F	T	A	D	L	N	E	L	L	T	D	P	E	I	E	L	I	T	I	C	T	P	A	H	T	H	Y	D	L	A
Template Known Secondary structure										S							T					T	T		T	T									T	T												T	T					S							T		T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R
Query Conservation
Alig confidence																																																																														.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		K	Q	A	I	L	A	G	K	S	V	I	V	E	K	P	F	C	D	T	L	E	H	A	E	E	L	F	A	L	G	Q	E	K	G	V	V	V	X	P	Y	Q	N	R	R	F	D	G	D	Y	L	A	X	K	Q	V	V	E	Q	G	F	L	G	E	I	N	E	V	E	T	H	I	D	Y	Y	R	P	.	.	.	G
Template Known Secondary structure							T	T							S		S		S	S															T								G	G	G	G													T	T	T	T		S											B		T	.	.	.	T
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A	F	N	W	P	E
Query Conservation
Alig confidence																																.																.	.	.	.
Template Conservation																																.																.	.	.	.
Template Sequence		S	I	T	E	Q	G	P	K	E	N	G	S	F	Y	G	L	G	I	H	L	X	D	R	X	I	A	L	F	G	R	.	P	D	Q	V	T	Y	D	I	R	N	N	E	V	S	E	.	.	.	.	A	V	D	N	Y	F	D	V	D	L	H	Y	G	S	K	L	K	V	K	V	K	T	N	H	S	V	A	S	P	Y
Template Known Secondary structure		S			S				G	G	G	S					T															.		S									S	S		T	T	.	.	.	.	S												T	T	T									S	B		S	S
Template Predicted Secondary structure																																.																.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	V	I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R	K	E	T	L	F
Query Conservation
Alig confidence																																																									.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		P	R	F	I	V	H	G	S	N	G	S	F	I	K	Y	G	E	D	Q	Q	E	N	D	L	K	A	G	I	X	P	D	A	P	G	F	G	E	D	S	P	X	Y	Y	G	E	V	T	Y	R	N	G	N	G	D	W	.	.	.	.	.	.	I	K	K	Q	I	K	T	P	V	G	D	Y	G	R	Y	Y	D	A	V
Template Known Secondary structure			S						S	S							S									T	T	T			T	T	S	T	T	T	T				G	G	G									T	T				.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	N	I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	K	V	K	I	S	E
Query Conservation
Alig confidence												.	.	.	.	.	.																								.
Template Conservation												.	.	.	.	.	.																								.
Template Sequence		Y	E	T	L	K	N	G	A	P	Q	.	.	.	.	.	.	L	V	T	K	E	Q	A	L	T	N	I	E	I	L	E	A	G	F	L	N	P	S	P	.	S	V	Y	H	L	K	E
Template Known Secondary structure						T	T					.	.	.	.	.	.	S	S															T	T	T	S		S	S	.
Template Predicted Secondary structure												.	.	.	.	.	.																								.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320							.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions