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Job DescriptionP39353
Confidence100.00%DateThu Jan 5 11:59:42 GMT 2012
Rank26Aligned Residues318
% Identity21%Templatec3ec7C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dehydrogenase; PDBTitle: crystal structure of putative dehydrogenase from salmonella2 typhimurium lt2
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  INYGVVGVGYFGAELARFM. NMHDNAKITCVYDP. . ENGENIARELQCI. . NMSSLDALVSSKLVDCVIVATPNYLHKEP
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Template Sequence  LKAGIVGIGXIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADV
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Query Sequence  VIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVT. FMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQ
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Template Sequence  AVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRXVQIGFXRRYDKGYVQLKNIIDSGEIGQPLXVHGRHYNA. . . .
Template Known Secondary structure  TT

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Query Sequence  ERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNW
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Template Sequence  . . . STVPEYKTPQAIYETLIHEIDVXHWLLNEDYKTVKVYFPRQSSLVT. . . TLRDPQLVVXETTSGINIVVEVFVNCQY
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Query Sequence  P. EHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKE
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Template Sequence  GYDIHCDVTGEKGXAELPTVASAAVRKAAKYST. . . . . . . . . . . . . . . . . . . . . . . . . . . . . DILVDWKQRFIDAYDIEF
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Query Sequence  TLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKIS
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Template Sequence  QDFFDRLNAGLPPAGP. . . . . TSWDGYLAAVTADACVKSQETGNTEIVE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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