Job Description P39353 Confidence 100.00% Date Thu Jan 5 11:59:42 GMT 2012 Rank 2 Aligned Residues 342 % Identity 19% Template c3e18A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	N	Y	G	V	V	G	V	G	Y	F	G	A	E	L	A	R	F	M	N	M	H	D	N	A	K	I	T	C	V	Y	D	P	.	E	N	G	E	N	I	A	R	E	L	Q	C	I	N	M	S	S	L	D	A	L	V	S	S	K	L	V	D	C	V	I	V	A	T	P	N	Y	L	H	K	E	P	V	I	K	A
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		Y	Q	L	V	I	V	G	Y	G	G	M	G	S	Y	H	V	T	L	A	S	A	A	D	N	L	E	V	H	G	V	F	D	I	L	A	E	K	R	E	A	A	A	Q	K	G	L	K	I	Y	E	S	Y	E	A	V	L	A	D	E	K	V	D	A	V	L	I	A	T	P	N	D	S	H	K	E	L	A	I	S	A
Template Known Secondary structure										S												T	S	T	T									S	S									T	T	T			B		S									T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	K	K	H	V	F	C	E	K	P	I	A	L	S	Y	E	D	C	V	D	M	V	K	A	C	K	E	A	G	V	T	F	M	A	G	H	I	M	N	F	F	N	G	V	Q	Y	A	R	K	L	I	K	E	G	V	I	G	E	I	L	S	C	H	T	K	R	N	G	W	E	N	K	Q	E	R	L	S	W
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence		L	E	A	G	K	H	V	V	C	E	K	P	V	T	M	T	S	E	D	L	L	A	I	M	D	V	A	K	R	V	N	K	H	F	M	V	H	Q	N	R	R	W	D	E	D	F	L	I	I	K	E	M	F	E	Q	K	T	I	G	E	M	F	H	L	E	S	R	V	H	G	A	N	G	.	I	P	G	D	W	R
Template Known Secondary structure				T	T							S	S			S	S															T								G	G	G	G														T	T	T	S	S											S	S		.	S		S	S	G	G
Template Predicted Secondary structure																																																																											.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	M	K	E	Q	S	G	G	H	L	Y	H	H	I	H	E	L	D	C	V	Q	H	L	L	G	E	I	P	E	T	V	T	M	I	G	G	N	L	A	H	S	G	P	G	F	G	N	E	D	D	M	L	F	M	T	L	E	F	P	S	G	K	L	A	T	L	E	W	G	S	A	F	N	W	P	E	H	Y	V
Query Conservation
Alig confidence																																														.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		H	L	K	A	H	G	G	G	M	V	L	D	W	G	V	H	L	L	D	Q	L	L	F	L	V	D	S	N	V	K	S	V	S	A	N	L	S	F	A	L	G	D	E	V	.	.	.	.	.	D	D	G	F	V	T	F	I	T	F	E	N	G	I	T	A	Q	I	E	V	G	T	T	N	F	I	K	L	P	R	W
Template Known Secondary structure		G		G	G	G	T		S					T														S												T	T			S	S	.	.	.	.	.		S									T	T	S									S	S		S	S				S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	G	T	K	G	S	I	K	I	D	M	Q	E	T	A	G	S	L	R	I	G	G	Q	T	K	H	F	L	V	H	E	T	Q	E	E	D	D	D	R	R	K	G	N	M	T	S	E	M	D	G	A	I	A	Y	G	H	P	G	K	K	T	P	L	W	L	A	S	L	I	R	K	E	T	L	F	L	H	N
Query Conservation
Alig confidence																																																																						.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		Y	V	K	G	T	E	G	T	G	I	I	H	D	W	D	L	S	G	E	I	V	K	P	T	A	L	A	K	T	S	E	P	T	P	I	K	A	G	Q	G	L	T	K	T	M	A	P	P	S	E	E	A	T	N	T	L	S	L	P	A	P	A	K	L	A	P	S	F	.	.	.	.	.	Y	N	N	F	V	D	V
Template Known Secondary structure						T	T							S	T	T										T	T	T	T	T									T	T				S	T	T	S				G	G	G														S			.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	C	G	A	K	P	E	E	D	Y	I	D	L	L	N	G	E	A	A	M	S	A	I	A	T	A	D	A	A	T	L	S	R	S	Q	D	R	K	V
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		L	N	N	T	S	E	P	.	.	.	.	.	.	I	V	Q	N	E	E	V	Y	Q	V	L	K	L	I	E	A	I	F	E	A	A	E	T	N	R	T	V
Template Known Secondary structure			T	T	S	S			.	.	.	.	.	.	S	S																						T	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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